STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN02949497_3190Endonuclease, Uma2 family (Restriction endonuclease fold). (193 aa)    
Predicted Functional Partners:
SAMN02949497_3191
NADPH2:quinone reductase.
 
     0.771
SAMN02949497_3192
Cell wall-associated hydrolase, NlpC family.
       0.741
SAMN02949497_3189
Transcriptional regulator, TetR family.
       0.678
SAMN02949497_0858
Uncharacterized conserved protein, DUF433 family.
  
     0.659
SAMN02949497_3203
Endonuclease, Uma2 family (Restriction endonuclease fold).
  
     0.650
SAMN02949497_4551
Endonuclease, Uma2 family (Restriction endonuclease fold).
  
     0.649
SAMN02949497_2277
Endonuclease, Uma2 family (Restriction endonuclease fold).
  
     0.646
SAMN02949497_3996
Endonuclease, Uma2 family (Restriction endonuclease fold).
  
     0.637
SAMN02949497_1337
Endonuclease, Uma2 family (Restriction endonuclease fold).
  
     0.635
SAMN02949497_0716
Endonuclease, Uma2 family (Restriction endonuclease fold).
  
     0.632
Your Current Organism:
Methylomagnum ishizawai
NCBI taxonomy Id: 1760988
Other names: DSM 29768, JCM 18894, KCTC 4681, M. ishizawai, Methylocaldum sp. 175, Methylomagnum ishizawai Khalifa et al. 2015 emend. Frindte et al. 2017, NBRC 109438, strain RS11D-Pr
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