STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
SAMN02949497_3294Two-component system, chemotaxis family, response regulator WspF; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (348 aa)    
Predicted Functional Partners:
SAMN02949497_3293
Two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE.
 
 0.998
SAMN02949497_3292
Hpt domain-containing protein.
 
 0.993
SAMN02949497_3291
Chemotaxis-related protein WspD.
 
 
 0.989
SAMN02949497_2302
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.988
SAMN02949497_1419
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.986
SAMN02949497_3290
Chemotaxis protein methyltransferase WspC.
 
 0.985
SAMN02949497_0250
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.983
SAMN02949497_2457
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.983
SAMN02949497_3289
Chemotaxis-related protein WspB.
 
 
 0.983
SAMN02949497_3283
Methyl-accepting chemotaxis protein WspA.
 
 0.973
Your Current Organism:
Methylomagnum ishizawai
NCBI taxonomy Id: 1760988
Other names: DSM 29768, JCM 18894, KCTC 4681, M. ishizawai, Methylocaldum sp. 175, Methylomagnum ishizawai Khalifa et al. 2015 emend. Frindte et al. 2017, NBRC 109438, strain RS11D-Pr
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