STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN02949497_3532Endonuclease G. (272 aa)    
Predicted Functional Partners:
SAMN02949497_0797
Putative glucose-6-phosphate 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family.
  
 
   0.822
SAMN02949497_0826
[NiFe] hydrogenase diaphorase moiety large subunit.
   
    0.704
SAMN02949497_2043
Uncharacterized protein.
  
     0.608
SAMN02949497_3040
Rubredoxin.
    
 
 0.588
SAMN02949497_3112
Sulfide dehydrogenase (Flavocytochrome c), flavoprotein subunit.
    
 
 0.588
SAMN02949497_4594
Sulfide:quinone oxidoreductase.
    
 
 0.588
SAMN02949497_3531
Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family.
       0.543
SAMN02949497_2212
NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
    0.529
SAMN02949497_3646
Formate dehydrogenase iron-sulfur subunit.
   
    0.529
nuoC
NADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
   0.508
Your Current Organism:
Methylomagnum ishizawai
NCBI taxonomy Id: 1760988
Other names: DSM 29768, JCM 18894, KCTC 4681, M. ishizawai, Methylocaldum sp. 175, Methylomagnum ishizawai Khalifa et al. 2015 emend. Frindte et al. 2017, NBRC 109438, strain RS11D-Pr
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.