STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN02949497_4120Formylmethanofuran dehydrogenase, subunit C. (271 aa)    
Predicted Functional Partners:
ffsA
Formylmethanofuran--tetrahydromethanopterin formyltransferase; Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT); Belongs to the FTR family.
 
 
 0.999
SAMN02949497_4122
Formylmethanofuran dehydrogenase, subunit A.
 
 
 0.999
SAMN02949497_4552
Formylmethanofuran dehydrogenase, subunit B.
 
 
 0.997
mch
Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT; Belongs to the MCH family.
  
 0.975
SAMN02949497_4554
Predicted ATP-dependent carboligase, ATP-grasp superfamily.
 
     0.801
SAMN02949497_4553
Beta-RFAP synthase.
 
     0.800
SAMN02949497_4557
Triphosphoribosyl-dephospho-CoA synthase.
 
     0.800
SAMN02949497_4559
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Belongs to the HisA/HisF family.
 
   
 0.798
SAMN02949497_4558
5,6,7,8-tetrahydromethanopterin hydro-lyase.
 
     0.796
SAMN02949497_1129
Uncharacterized protein.
 
     0.795
Your Current Organism:
Methylomagnum ishizawai
NCBI taxonomy Id: 1760988
Other names: DSM 29768, JCM 18894, KCTC 4681, M. ishizawai, Methylocaldum sp. 175, Methylomagnum ishizawai Khalifa et al. 2015 emend. Frindte et al. 2017, NBRC 109438, strain RS11D-Pr
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