STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN02949497_4691Uncharacterized protein. (95 aa)    
Predicted Functional Partners:
SAMN02949497_3749
Predicted thiol-disulfide oxidoreductase YuxK, DCC family.
  
     0.682
SAMN02949497_3777
Putative copper resistance protein D.
  
     0.635
SAMN02949497_1465
AAA domain-containing protein.
  
     0.611
SAMN02949497_4692
Uncharacterized protein.
       0.563
SAMN02949497_4085
Uncharacterized protein.
  
     0.554
SAMN02949497_2754
Multicopper oxidase.
  
     0.546
SAMN02949497_4261
Pyrimidine reductase, riboflavin biosynthesis.
  
     0.475
SAMN02949497_2153
Metallo-peptidase family M12B Reprolysin-like.
  
     0.450
SAMN02949497_3039
50S ribosome-binding GTPase.
  
     0.431
SAMN02949497_2793
Uncharacterized protein.
  
     0.423
Your Current Organism:
Methylomagnum ishizawai
NCBI taxonomy Id: 1760988
Other names: DSM 29768, JCM 18894, KCTC 4681, M. ishizawai, Methylocaldum sp. 175, Methylomagnum ishizawai Khalifa et al. 2015 emend. Frindte et al. 2017, NBRC 109438, strain RS11D-Pr
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.