STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI72460.1Transcriptional attenuator, LytR family. (541 aa)    
Predicted Functional Partners:
purK
5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).
 
     0.865
purE
5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
       0.840
SEI72522.1
Acetyltransferase (GNAT) domain-containing protein.
 
     0.698
SEI72491.1
Mannose-6-phosphate isomerase, type 1.
       0.697
SEI76062.1
Hypothetical protein.
  
     0.660
SEI80671.1
Hypothetical protein.
  
     0.584
SEI72374.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
       0.577
SEI68054.1
Glyoxalase-like domain-containing protein.
  
     0.571
SEI72599.1
Protein of unknown function.
  
     0.554
SEI67310.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.553
Your Current Organism:
Arthrobacter sp. yr096
NCBI taxonomy Id: 1761750
Other names: A. sp. yr096
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.