STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ33184.1Transcriptional regulator, LacI family. (323 aa)    
Predicted Functional Partners:
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 0.974
rbsA
Ribose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 
 0.964
SDZ33222.1
Ribose ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.958
SDZ33231.1
Ribose-binding protein.
 
 
0.945
rbsD
Ribose transport protein RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
 
 0.893
SDZ28378.1
Glutamate synthase (ferredoxin).
    
 
 0.846
SDZ27008.1
Amino acid adenylation domain-containing protein.
    
 
 0.816
SDZ26988.1
Amino acid adenylation domain-containing protein.
    
 
 0.808
SDY46924.1
PTS system D-glucose-specific IIA component, Glc family /PTS system D-glucose-specific IIB component, Glc family /PTS system D-glucose-specific IIC component, Glc family.
  
 
 0.807
SDZ21792.1
PTS system trehalose-specific IIB component, Glc family /PTS system trehalose-specific IIC component, Glc family.
  
 
 0.745
Your Current Organism:
Bacillus sp. 166amftsu
NCBI taxonomy Id: 1761753
Other names: B. sp. 166amftsu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.