STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO50710.1Sugar phosphate permease. (460 aa)    
Predicted Functional Partners:
SDO50691.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
 
     0.695
SDO50666.1
DNA-binding transcriptional regulator, GntR family.
       0.558
SDO50611.1
3,4-dihydroxyphenylacetate 2,3-dioxygenase.
 
     0.409
SDO50753.1
Acetolactate synthase large subunit.
  
  
  0.406
Your Current Organism:
Microbacterium sp. ru3701
NCBI taxonomy Id: 1761809
Other names: M. sp. ru370.1, Microbacterium sp. ru370.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.