STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF51777.1Extracellular solute-binding protein, family 5 Middle. (594 aa)    
Predicted Functional Partners:
SDF51904.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.939
SDF51805.1
Oligopeptide transport system permease protein.
 
 
 0.935
SDF51834.1
Oligopeptide transport system permease protein.
 
 
 0.933
SDF51869.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.898
SDG07512.1
Peptide/nickel transport system permease protein.
 
 
 0.861
SDE64953.1
Oligopeptide transport system permease protein.
 
 
 0.860
SDE64919.1
Oligopeptide transport system permease protein.
 
 
 0.833
SDG07482.1
Peptide/nickel transport system permease protein.
 
 
 0.829
SDF80860.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 
 0.746
SDE64881.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.698
Your Current Organism:
Paenibacillus sp. cl6col
NCBI taxonomy Id: 1761878
Other names: P. sp. cl6col
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.