Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE33910.1 | SDE79101.1 | SAMN04488689_101143 | SAMN04488689_102602 | Nucleoid-associated protein YgaU, contains BON and LysM domains. | Hypothetical protein. | 0.571 |
SDE33910.1 | SDE79159.1 | SAMN04488689_101143 | SAMN04488689_102603 | Nucleoid-associated protein YgaU, contains BON and LysM domains. | NAD(P)H dehydrogenase (quinone). | 0.571 |
SDE33910.1 | SDE95535.1 | SAMN04488689_101143 | SAMN04488689_103118 | Nucleoid-associated protein YgaU, contains BON and LysM domains. | Hypothetical protein. | 0.673 |
SDE33910.1 | SDF72456.1 | SAMN04488689_101143 | SAMN04488689_106308 | Nucleoid-associated protein YgaU, contains BON and LysM domains. | Hypothetical protein. | 0.738 |
SDE63631.1 | SDE73359.1 | SAMN04488689_10246 | SAMN04488689_102383 | Methyl-accepting chemotaxis protein. | Glycosyltransferase, GT2 family. | 0.411 |
SDE63631.1 | SDF72456.1 | SAMN04488689_10246 | SAMN04488689_106308 | Methyl-accepting chemotaxis protein. | Hypothetical protein. | 0.759 |
SDE63631.1 | SDF72485.1 | SAMN04488689_10246 | SAMN04488689_106309 | Methyl-accepting chemotaxis protein. | Signal transduction histidine kinase. | 0.406 |
SDE63631.1 | ribBA | SAMN04488689_10246 | SAMN04488689_102241 | Methyl-accepting chemotaxis protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.877 |
SDE73359.1 | SDE63631.1 | SAMN04488689_102383 | SAMN04488689_10246 | Glycosyltransferase, GT2 family. | Methyl-accepting chemotaxis protein. | 0.411 |
SDE73359.1 | SDF06534.1 | SAMN04488689_102383 | SAMN04488689_103508 | Glycosyltransferase, GT2 family. | Hypothetical protein. | 0.448 |
SDE73359.1 | SDF72456.1 | SAMN04488689_102383 | SAMN04488689_106308 | Glycosyltransferase, GT2 family. | Hypothetical protein. | 0.727 |
SDE73359.1 | ribBA | SAMN04488689_102383 | SAMN04488689_102241 | Glycosyltransferase, GT2 family. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.760 |
SDE79101.1 | SDE33910.1 | SAMN04488689_102602 | SAMN04488689_101143 | Hypothetical protein. | Nucleoid-associated protein YgaU, contains BON and LysM domains. | 0.571 |
SDE79101.1 | SDE79159.1 | SAMN04488689_102602 | SAMN04488689_102603 | Hypothetical protein. | NAD(P)H dehydrogenase (quinone). | 0.727 |
SDE79101.1 | SDF72456.1 | SAMN04488689_102602 | SAMN04488689_106308 | Hypothetical protein. | Hypothetical protein. | 0.683 |
SDE79159.1 | SDE33910.1 | SAMN04488689_102603 | SAMN04488689_101143 | NAD(P)H dehydrogenase (quinone). | Nucleoid-associated protein YgaU, contains BON and LysM domains. | 0.571 |
SDE79159.1 | SDE79101.1 | SAMN04488689_102603 | SAMN04488689_102602 | NAD(P)H dehydrogenase (quinone). | Hypothetical protein. | 0.727 |
SDE79159.1 | SDF72456.1 | SAMN04488689_102603 | SAMN04488689_106308 | NAD(P)H dehydrogenase (quinone). | Hypothetical protein. | 0.683 |
SDE95535.1 | SDE33910.1 | SAMN04488689_103118 | SAMN04488689_101143 | Hypothetical protein. | Nucleoid-associated protein YgaU, contains BON and LysM domains. | 0.673 |
SDE95535.1 | SDF72456.1 | SAMN04488689_103118 | SAMN04488689_106308 | Hypothetical protein. | Hypothetical protein. | 0.683 |
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