Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDJ07823.1 | SDJ07859.1 | SAMN04487898_101253 | SAMN04487898_101254 | Putative collagen-binding domain of a collagenase. | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | 0.920 |
SDJ07823.1 | SDJ07892.1 | SAMN04487898_101253 | SAMN04487898_101255 | Putative collagen-binding domain of a collagenase. | BNR repeat-like domain-containing protein. | 0.955 |
SDJ07823.1 | SDJ07956.1 | SAMN04487898_101253 | SAMN04487898_101257 | Putative collagen-binding domain of a collagenase. | Beta-galactosidase/beta-glucuronidase. | 0.796 |
SDJ07823.1 | SDJ07990.1 | SAMN04487898_101253 | SAMN04487898_101258 | Putative collagen-binding domain of a collagenase. | alpha-L-rhamnosidase. | 0.791 |
SDJ07823.1 | SDJ08023.1 | SAMN04487898_101253 | SAMN04487898_101259 | Putative collagen-binding domain of a collagenase. | Predicted neuraminidase (sialidase). | 0.741 |
SDJ07823.1 | SDJ08057.1 | SAMN04487898_101253 | SAMN04487898_101260 | Putative collagen-binding domain of a collagenase. | Acetyl xylan esterase (AXE1). | 0.881 |
SDJ07823.1 | SDJ08098.1 | SAMN04487898_101253 | SAMN04487898_101261 | Putative collagen-binding domain of a collagenase. | Sugar phosphate isomerase/epimerase. | 0.876 |
SDJ07823.1 | SDJ08132.1 | SAMN04487898_101253 | SAMN04487898_101262 | Putative collagen-binding domain of a collagenase. | Protein of unknown function. | 0.858 |
SDJ07823.1 | SDJ08169.1 | SAMN04487898_101253 | SAMN04487898_101263 | Putative collagen-binding domain of a collagenase. | Predicted dehydrogenase. | 0.806 |
SDJ07823.1 | SDJ08244.1 | SAMN04487898_101253 | SAMN04487898_101265 | Putative collagen-binding domain of a collagenase. | alpha-L-rhamnosidase. | 0.829 |
SDJ07859.1 | SDJ07823.1 | SAMN04487898_101254 | SAMN04487898_101253 | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | Putative collagen-binding domain of a collagenase. | 0.920 |
SDJ07859.1 | SDJ07892.1 | SAMN04487898_101254 | SAMN04487898_101255 | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | BNR repeat-like domain-containing protein. | 0.967 |
SDJ07859.1 | SDJ07956.1 | SAMN04487898_101254 | SAMN04487898_101257 | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | Beta-galactosidase/beta-glucuronidase. | 0.882 |
SDJ07859.1 | SDJ07990.1 | SAMN04487898_101254 | SAMN04487898_101258 | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | alpha-L-rhamnosidase. | 0.693 |
SDJ07859.1 | SDJ08023.1 | SAMN04487898_101254 | SAMN04487898_101259 | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | Predicted neuraminidase (sialidase). | 0.795 |
SDJ07859.1 | SDJ08057.1 | SAMN04487898_101254 | SAMN04487898_101260 | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | Acetyl xylan esterase (AXE1). | 0.834 |
SDJ07859.1 | SDJ08098.1 | SAMN04487898_101254 | SAMN04487898_101261 | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | Sugar phosphate isomerase/epimerase. | 0.806 |
SDJ07859.1 | SDJ08132.1 | SAMN04487898_101254 | SAMN04487898_101262 | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | Protein of unknown function. | 0.859 |
SDJ07859.1 | SDJ08169.1 | SAMN04487898_101254 | SAMN04487898_101263 | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | Predicted dehydrogenase. | 0.674 |
SDJ07859.1 | SDJ08244.1 | SAMN04487898_101254 | SAMN04487898_101265 | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | alpha-L-rhamnosidase. | 0.656 |
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