STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgAStarch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (468 aa)    
Predicted Functional Partners:
SDJ71077.1
Glucose-1-phosphate adenylyltransferase.
 
 
 0.997
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 0.992
SDL46415.1
Starch synthase.
  
  
  0.972
SDJ25368.1
1,4-alpha-glucan branching enzyme.
 
 
 0.873
SDL07257.1
Starch phosphorylase.
 
 
 0.851
SDJ25680.1
Hypothetical protein.
  
 
 0.776
SDK00328.1
Glycosyl transferases group 1.
     
 0.754
SDJ25591.1
Glycosidase; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.699
SDL48135.1
Iron-containing alcohol dehydrogenase.
   
    0.650
SDJ25450.1
Glycosidase.
  
 
 0.642
Your Current Organism:
Pedobacter sp. ok626
NCBI taxonomy Id: 1761882
Other names: P. sp. ok626
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.