STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK01452.1Fucose permease. (514 aa)    
Predicted Functional Partners:
SDK01392.1
Putative membrane-bound dehydrogenase domain-containing protein.
 
     0.869
SDK01551.1
Predicted dehydrogenase.
 
    0.856
SDK01510.1
D-psicose/D-tagatose/L-ribulose 3-epimerase.
 
     0.852
SDK01343.1
AraC-type DNA-binding protein.
 
     0.547
SDL76132.1
Predicted dehydrogenase.
  
    0.527
SDK13909.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.516
SDL01177.1
Protein of unknown function.
  
     0.506
SDL93532.1
Protein of unknown function.
 
     0.501
SDK01599.1
PAS domain S-box-containing protein.
       0.459
SDL76242.1
FAD dependent oxidoreductase.
  
     0.444
Your Current Organism:
Pedobacter sp. ok626
NCBI taxonomy Id: 1761882
Other names: P. sp. ok626
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.