STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK80116.1Hypothetical protein. (214 aa)    
Predicted Functional Partners:
SDK84944.1
Signal transduction histidine kinase.
  
 0.972
SDJ30439.1
PAS domain S-box-containing protein.
  
 0.924
SDK51404.1
Response regulator receiver domain-containing protein.
  
 0.921
SDK64939.1
ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain.
   
 0.902
SDL96156.1
Signal transduction histidine kinase.
  
 0.902
SDJ25044.1
Signal transduction histidine kinase.
  
 0.898
SDK51452.1
PAS domain S-box-containing protein.
  
 0.812
SDL11933.1
PAS domain S-box-containing protein.
   
 0.786
SDL59603.1
His Kinase A (phospho-acceptor) domain-containing protein.
   
 0.786
SDJ25124.1
Signal transduction histidine kinase.
  
 0.777
Your Current Organism:
Pedobacter sp. ok626
NCBI taxonomy Id: 1761882
Other names: P. sp. ok626
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.