Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDJ01795.1 | SDK95310.1 | SAMN04487898_10188 | SAMN04487898_113112 | Cytochrome b6-f complex iron-sulfur subunit. | NIPSNAP protein. | 0.451 |
SDJ06668.1 | SDK16013.1 | SAMN04487898_101222 | SAMN04487898_106202 | Protein of unknown function. | Gluconate 2-dehydrogenase subunit 3. | 0.448 |
SDJ06668.1 | SDK95310.1 | SAMN04487898_101222 | SAMN04487898_113112 | Protein of unknown function. | NIPSNAP protein. | 0.501 |
SDJ06668.1 | SDL01177.1 | SAMN04487898_101222 | SAMN04487898_11416 | Protein of unknown function. | Protein of unknown function. | 0.560 |
SDJ29299.1 | SDK95310.1 | SAMN04487898_102190 | SAMN04487898_113112 | Glucose / Sorbosone dehydrogenase. | NIPSNAP protein. | 0.461 |
SDK16013.1 | SDJ06668.1 | SAMN04487898_106202 | SAMN04487898_101222 | Gluconate 2-dehydrogenase subunit 3. | Protein of unknown function. | 0.448 |
SDK16013.1 | SDK95310.1 | SAMN04487898_106202 | SAMN04487898_113112 | Gluconate 2-dehydrogenase subunit 3. | NIPSNAP protein. | 0.597 |
SDK95310.1 | SDJ01795.1 | SAMN04487898_113112 | SAMN04487898_10188 | NIPSNAP protein. | Cytochrome b6-f complex iron-sulfur subunit. | 0.451 |
SDK95310.1 | SDJ06668.1 | SAMN04487898_113112 | SAMN04487898_101222 | NIPSNAP protein. | Protein of unknown function. | 0.501 |
SDK95310.1 | SDJ29299.1 | SAMN04487898_113112 | SAMN04487898_102190 | NIPSNAP protein. | Glucose / Sorbosone dehydrogenase. | 0.461 |
SDK95310.1 | SDK16013.1 | SAMN04487898_113112 | SAMN04487898_106202 | NIPSNAP protein. | Gluconate 2-dehydrogenase subunit 3. | 0.597 |
SDK95310.1 | SDK95354.1 | SAMN04487898_113112 | SAMN04487898_113113 | NIPSNAP protein. | Hypothetical protein. | 0.780 |
SDK95310.1 | SDK95422.1 | SAMN04487898_113112 | SAMN04487898_113115 | NIPSNAP protein. | Probable phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. | 0.540 |
SDK95310.1 | SDL01177.1 | SAMN04487898_113112 | SAMN04487898_11416 | NIPSNAP protein. | Protein of unknown function. | 0.527 |
SDK95310.1 | SDL87083.1 | SAMN04487898_113112 | SAMN04487898_12718 | NIPSNAP protein. | RNA polymerase sigma factor, sigma-70 family. | 0.522 |
SDK95310.1 | mqnA | SAMN04487898_113112 | SAMN04487898_113116 | NIPSNAP protein. | Chorismate dehydratase; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.533 |
SDK95310.1 | mqnE | SAMN04487898_113112 | SAMN04487898_113114 | NIPSNAP protein. | Aminodeoxyfutalosine synthase; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate. | 0.540 |
SDK95354.1 | SDK95310.1 | SAMN04487898_113113 | SAMN04487898_113112 | Hypothetical protein. | NIPSNAP protein. | 0.780 |
SDK95354.1 | SDK95422.1 | SAMN04487898_113113 | SAMN04487898_113115 | Hypothetical protein. | Probable phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. | 0.540 |
SDK95354.1 | mqnA | SAMN04487898_113113 | SAMN04487898_113116 | Hypothetical protein. | Chorismate dehydratase; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.533 |
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