STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL03996.1Cytochrome c oxidase accessory protein FixG. (465 aa)    
Predicted Functional Partners:
SDL04119.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.990
SDL04034.1
Cytochrome c oxidase cbb3-type subunit 3.
  
 0.983
SDL03909.1
Hypothetical protein.
 
   
 0.964
SDK28379.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
 
 
 0.962
SDL04203.1
Cu+-exporting ATPase.
 
  
 0.929
SDL03946.1
Hypothetical protein.
 
  
 0.923
SDL04158.1
Cytochrome oxidase maturation protein, cbb3-type.
 
  
 0.919
SDL04077.1
Hypothetical protein.
       0.853
SDL03875.1
Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.764
SDK38292.1
4Fe-4S dicluster domain-containing protein.
 
 
 0.667
Your Current Organism:
Pedobacter sp. ok626
NCBI taxonomy Id: 1761882
Other names: P. sp. ok626
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.