Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDJ36512.1 | SDL21972.1 | SAMN04487898_102369 | SAMN04487898_11653 | GMP synthase-Glutamine amidotransferase. | HPP family protein. | 0.600 |
SDJ36512.1 | apt | SAMN04487898_102369 | SAMN04487898_116136 | GMP synthase-Glutamine amidotransferase. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.529 |
SDJ36512.1 | guaA | SAMN04487898_102369 | SAMN04487898_13010 | GMP synthase-Glutamine amidotransferase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.561 |
SDJ36512.1 | guaB | SAMN04487898_102369 | SAMN04487898_121113 | GMP synthase-Glutamine amidotransferase. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.977 |
SDJ62724.1 | SDL21972.1 | SAMN04487898_103425 | SAMN04487898_11653 | Acetoin utilization deacetylase AcuC. | HPP family protein. | 0.468 |
SDK93796.1 | SDL21972.1 | SAMN04487898_11372 | SAMN04487898_11653 | Osmoprotectant transport system permease protein. | HPP family protein. | 0.704 |
SDK93796.1 | guaB | SAMN04487898_11372 | SAMN04487898_121113 | Osmoprotectant transport system permease protein. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.668 |
SDK94408.1 | SDL21972.1 | SAMN04487898_11389 | SAMN04487898_11653 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | HPP family protein. | 0.539 |
SDK94408.1 | guaA | SAMN04487898_11389 | SAMN04487898_13010 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.565 |
SDK94408.1 | guaB | SAMN04487898_11389 | SAMN04487898_121113 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.609 |
SDL21927.1 | SDL21972.1 | SAMN04487898_11652 | SAMN04487898_11653 | Hypothetical protein. | HPP family protein. | 0.618 |
SDL21972.1 | SDJ36512.1 | SAMN04487898_11653 | SAMN04487898_102369 | HPP family protein. | GMP synthase-Glutamine amidotransferase. | 0.600 |
SDL21972.1 | SDJ62724.1 | SAMN04487898_11653 | SAMN04487898_103425 | HPP family protein. | Acetoin utilization deacetylase AcuC. | 0.468 |
SDL21972.1 | SDK93796.1 | SAMN04487898_11653 | SAMN04487898_11372 | HPP family protein. | Osmoprotectant transport system permease protein. | 0.704 |
SDL21972.1 | SDK94408.1 | SAMN04487898_11653 | SAMN04487898_11389 | HPP family protein. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.539 |
SDL21972.1 | SDL21927.1 | SAMN04487898_11653 | SAMN04487898_11652 | HPP family protein. | Hypothetical protein. | 0.618 |
SDL21972.1 | SDL30271.1 | SAMN04487898_11653 | SAMN04487898_11721 | HPP family protein. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.515 |
SDL21972.1 | apt | SAMN04487898_11653 | SAMN04487898_116136 | HPP family protein. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.551 |
SDL21972.1 | guaA | SAMN04487898_11653 | SAMN04487898_13010 | HPP family protein. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.918 |
SDL21972.1 | guaB | SAMN04487898_11653 | SAMN04487898_121113 | HPP family protein. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.658 |
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