Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL79775.1 | SDL79853.1 | SAMN04487898_12539 | SAMN04487898_12540 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.942 |
SDL79775.1 | SDL79893.1 | SAMN04487898_12539 | SAMN04487898_12541 | Starch-binding associating with outer membrane. | Protein of unknown function. | 0.707 |
SDL79775.1 | SDL79934.1 | SAMN04487898_12539 | SAMN04487898_12542 | Starch-binding associating with outer membrane. | Heparan-sulfate lyase. | 0.854 |
SDL79775.1 | mnmA | SAMN04487898_12539 | SAMN04487898_12538 | Starch-binding associating with outer membrane. | tRNA-specific 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.467 |
SDL79853.1 | SDL79775.1 | SAMN04487898_12540 | SAMN04487898_12539 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.942 |
SDL79853.1 | SDL79893.1 | SAMN04487898_12540 | SAMN04487898_12541 | TonB-linked outer membrane protein, SusC/RagA family. | Protein of unknown function. | 0.742 |
SDL79853.1 | SDL79934.1 | SAMN04487898_12540 | SAMN04487898_12542 | TonB-linked outer membrane protein, SusC/RagA family. | Heparan-sulfate lyase. | 0.764 |
SDL79853.1 | mnmA | SAMN04487898_12540 | SAMN04487898_12538 | TonB-linked outer membrane protein, SusC/RagA family. | tRNA-specific 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.445 |
SDL79893.1 | SDL79775.1 | SAMN04487898_12541 | SAMN04487898_12539 | Protein of unknown function. | Starch-binding associating with outer membrane. | 0.707 |
SDL79893.1 | SDL79853.1 | SAMN04487898_12541 | SAMN04487898_12540 | Protein of unknown function. | TonB-linked outer membrane protein, SusC/RagA family. | 0.742 |
SDL79893.1 | SDL79934.1 | SAMN04487898_12541 | SAMN04487898_12542 | Protein of unknown function. | Heparan-sulfate lyase. | 0.720 |
SDL79893.1 | mnmA | SAMN04487898_12541 | SAMN04487898_12538 | Protein of unknown function. | tRNA-specific 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.418 |
SDL79934.1 | SDL79775.1 | SAMN04487898_12542 | SAMN04487898_12539 | Heparan-sulfate lyase. | Starch-binding associating with outer membrane. | 0.854 |
SDL79934.1 | SDL79853.1 | SAMN04487898_12542 | SAMN04487898_12540 | Heparan-sulfate lyase. | TonB-linked outer membrane protein, SusC/RagA family. | 0.764 |
SDL79934.1 | SDL79893.1 | SAMN04487898_12542 | SAMN04487898_12541 | Heparan-sulfate lyase. | Protein of unknown function. | 0.720 |
mnmA | SDL79775.1 | SAMN04487898_12538 | SAMN04487898_12539 | tRNA-specific 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | Starch-binding associating with outer membrane. | 0.467 |
mnmA | SDL79853.1 | SAMN04487898_12538 | SAMN04487898_12540 | tRNA-specific 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | TonB-linked outer membrane protein, SusC/RagA family. | 0.445 |
mnmA | SDL79893.1 | SAMN04487898_12538 | SAMN04487898_12541 | tRNA-specific 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | Protein of unknown function. | 0.418 |