STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP12782.1Glycosyl hydrolase-like 10. (549 aa)    
Predicted Functional Partners:
SFP12754.1
Carbon starvation protein CstA.
       0.684
SFP12725.1
Outer membrane protein W.
       0.563
SFP12696.1
Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family.
       0.555
SFP12671.1
Peptidase family M23.
       0.530
SFO59708.1
D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).
 
     0.498
SFP12641.1
Dipeptidase.
       0.476
SFO55094.1
Hypothetical protein.
  
  
  0.417
Your Current Organism:
Prevotella sp. tf25
NCBI taxonomy Id: 1761889
Other names: P. sp. tf2-5, Prevotella sp. tf2-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.