STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN76440.1Protein of unknown function. (256 aa)    
Predicted Functional Partners:
SIN76462.1
Outer membrane transport energization protein ExbB.
 
    0.976
SIN76450.1
Outer membrane transport energization protein ExbB.
 
    0.975
SIN76486.1
Outer membrane transport energization protein TonB.
 
     0.970
SIN76497.1
Tetratricopeptide repeat-containing protein.
 
 
   0.969
SIN76473.1
Outer membrane transport energization protein ExbD.
 
     0.962
SIN81678.1
Condensin subunit ScpA.
   
 
 0.855
SIO21395.1
Tetratricopeptide repeat-containing protein.
 
 
   0.798
SIO21339.1
Outer membrane transport energization protein ExbB.
 
    0.794
SIN76509.1
Hypothetical protein.
       0.785
SIO21351.1
Outer membrane transport energization protein ExbB.
 
    0.784
Your Current Organism:
Pseudoalteromonas sp. 1315
NCBI taxonomy Id: 1761891
Other names: P. sp. 13-15, Pseudoalteromonas sp. 13-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.