STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN79273.1Sodium transport system permease protein. (402 aa)    
Predicted Functional Partners:
SIN79261.1
Sodium transport system ATP-binding protein.
 
 
 0.997
SIN79250.1
Protein of unknown function.
 
     0.935
SIN79239.1
Zn-dependent amino-or carboxypeptidase, M28 family.
 
     0.805
SIN89116.1
ABC-2 type transport system permease protein.
  
 
 0.739
SIN79225.1
Putative, 10TM heavy-metal exporter.
       0.699
SIN79412.1
iron(III) transport system ATP-binding protein.
    
  0.679
SIN93171.1
iron(III) transport system ATP-binding protein.
    
  0.679
SIN83558.1
Hypothetical protein.
  
     0.659
SIO05927.1
Protein of unknown function.
  
     0.617
SIN91107.1
Protein of unknown function.
  
     0.580
Your Current Organism:
Pseudoalteromonas sp. 1315
NCBI taxonomy Id: 1761891
Other names: P. sp. 13-15, Pseudoalteromonas sp. 13-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.