STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN79905.1Uncharacterized membrane protein. (455 aa)    
Predicted Functional Partners:
SIN75316.1
Protein of unknown function.
  
     0.673
SIN79914.1
Hypothetical protein.
       0.647
SIN81758.1
Protease I.
  
     0.557
SIN79923.1
Hypothetical protein.
       0.499
SIO10445.1
DNA topoisomerase-1.
 
     0.477
SIO25421.1
Hemerythrin HHE cation binding domain-containing protein.
 
     0.456
SIN90336.1
Uncharacterized conserved protein YafD, endonuclease/exonuclease/phosphatase (EEP) superfamily.
 
     0.452
SIN79934.1
tRNA-(ms[2]io[6]A)-hydroxylase.
       0.426
SIO06976.1
Membrane protein.
 
     0.425
Your Current Organism:
Pseudoalteromonas sp. 1315
NCBI taxonomy Id: 1761891
Other names: P. sp. 13-15, Pseudoalteromonas sp. 13-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.