STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN84369.1Flavodoxin. (149 aa)    
Predicted Functional Partners:
SIN84383.1
tRNA pseudouridine synthase C.
       0.892
SIN84396.1
Uncharacterized conserved protein YqcC, DUF446 family.
       0.892
SIN96727.1
Sulfite reductase (NADPH) alpha subunit.
  
  
  0.822
SIN84407.1
Protein of unknown function.
 
     0.809
SIN96712.1
Sulfite reductase (NADPH) beta subunit.
  
  
 0.789
SIN84419.1
Protein of unknown function.
       0.783
SIN96704.1
Phosphoadenylylsulfate reductase (thioredoxin).
  
  
  0.490
SIN91783.1
cob(I)yrinic acid a,c-diamide adenosyltransferase.
     
 0.473
Your Current Organism:
Pseudoalteromonas sp. 1315
NCBI taxonomy Id: 1761891
Other names: P. sp. 13-15, Pseudoalteromonas sp. 13-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.