STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP54406.13-oxoacyl-[acyl-carrier protein] reductase. (246 aa)    
Predicted Functional Partners:
SDP15009.1
Acyl dehydratase.
 
 
  0.926
SDP25945.1
Cytochrome P450.
   
 0.813
SDP69311.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.774
ubiC
Chorismate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family.
       0.773
SDP63999.1
Glutamate synthase (NADH) large subunit.
     
 0.772
SDP06585.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
 
 0.757
SDP30786.1
CDP-4-dehydro-6-deoxyglucose reductase.
 
 0.750
SDP38191.1
Phenol 2-monooxygenase P5 subunit.
 
 0.750
SDP58489.1
CDP-4-dehydro-6-deoxyglucose reductase.
 
 0.750
SDP54379.1
Hypothetical protein.
       0.723
Your Current Organism:
Ralstonia sp. 25mfcol41
NCBI taxonomy Id: 1761899
Other names: R. sp. 25mfcol4.1, Ralstonia sp. 25mfcol4.1
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