STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CZT33767.1Predicted dehydrogenase. (328 aa)    
Predicted Functional Partners:
CZT33768.1
Predicted oxidoreductase.
   
  0.562
CZT33711.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Belongs to the TPP enzyme family.
  
  
 0.459
CZT34483.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
  
  
 0.459
lysS
lysyl-tRNA synthetase, class II; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.445
CZT33713.1
5-deoxy-glucuronate isomerase.
  
  
 0.444
CZT34485.1
5-deoxy-glucuronate isomerase.
  
  
 0.444
CZT36877.1
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.440
CZT33712.1
Inosose dehydratase.
   
 
  0.438
CZT34484.1
2-keto-myo-inositol dehydratase.
   
 
  0.438
CZT34490.1
Inosose dehydratase.
   
 
  0.438
Your Current Organism:
Rhizobium sp. 9140
NCBI taxonomy Id: 1761900
Other names: R. sp. 9140
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