STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN65325.1ABC-2 type transport system ATP-binding protein. (433 aa)    
Predicted Functional Partners:
SDN65356.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
     0.944
SDN65292.1
ABC-2 type transport system permease protein.
 
     0.866
SDN08246.1
ABC-2 type transport system permease protein.
 
 0.790
SDO12771.1
ABC-2 type transport system permease protein.
  
 0.749
SDO39492.1
ABC-2 type transport system permease protein.
  
 0.749
SDO69375.1
Hypothetical protein.
 
   
 0.722
SDN25415.1
Hypothetical protein.
 
     0.717
SDO12721.1
ABC-2 type transport system permease protein.
  
 0.715
SDM48648.1
ABC-2 type transport system permease protein.
 
     0.683
SDO79498.1
Right handed beta helix region.
  
 0.676
Your Current Organism:
Streptomyces sp. cf386
NCBI taxonomy Id: 1761904
Other names: S. sp. cf386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.