STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO97923.1Multidrug resistance protein, MATE family. (459 aa)    
Predicted Functional Partners:
SDP19835.1
Farnesyl-diphosphate farnesyltransferase.
   
 
 0.655
SDP19860.1
Squalene synthase HpnC.
   
 
 0.655
metE
Methionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
       0.625
SDN89394.1
SSU ribosomal protein S1P.
   
    0.549
SDO57564.1
Yip1 domain-containing protein.
   
    0.549
SDP04296.1
Small subunit ribosomal protein S1.
   
    0.549
SDN48944.1
Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
  
 0.541
SDN53527.1
Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
  
 0.541
SDN91624.1
Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
  
 0.541
SDP72113.1
Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
  
 0.541
Your Current Organism:
Streptomyces sp. cf386
NCBI taxonomy Id: 1761904
Other names: S. sp. cf386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.