STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP48769.1Hypothetical protein. (239 aa)    
Predicted Functional Partners:
SDM70565.1
Endoglucanase.
    
  0.780
SDP74982.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
  0.780
SDP75367.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
  0.780
SDM80307.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
   
 0.772
SDN74912.1
Peptidase inhibitor I9; Belongs to the peptidase S8 family.
   
 0.772
SDP38743.1
Serine protease.
   
 0.772
SDP56726.1
Peptidase inhibitor I9; Belongs to the peptidase S8 family.
   
 0.772
SDP48743.1
Predicted arabinose efflux permease, MFS family.
       0.769
SDP48790.1
Sortase family protein.
       0.658
SDN30909.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
    
 0.632
Your Current Organism:
Streptomyces sp. cf386
NCBI taxonomy Id: 1761904
Other names: S. sp. cf386
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