STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER56689.1TIGR00341 family protein. (310 aa)    
Predicted Functional Partners:
coaA
Pantothenate kinase.
       0.876
SES47919.1
Hypothetical protein.
  
     0.558
SES47890.1
Hypothetical protein.
  
     0.555
SER39112.1
Hypothetical protein.
       0.551
acpS
Holo-[acyl-carrier protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
       0.551
SES47224.1
HicB family protein.
  
     0.550
glmS-2
Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
       0.546
SES47227.1
Putative adhesin.
  
     0.460
Your Current Organism:
Streptomyces sp. yr375
NCBI taxonomy Id: 1761906
Other names: S. sp. yr375
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.