STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER97020.1Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. (517 aa)    
Predicted Functional Partners:
SER84477.1
MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein.
  
     0.614
SER97043.1
Transcriptional regulator, TetR family.
       0.586
SEP73780.1
Biotin carboxyl carrier protein.
  
 0.539
rnhB
RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.464
Your Current Organism:
Streptomyces sp. yr375
NCBI taxonomy Id: 1761906
Other names: S. sp. yr375
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.