STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFX09090.1Lysophospholipase L1. (269 aa)    
Predicted Functional Partners:
SFX09137.1
ABC-2 type transport system permease protein.
 
    0.950
SFX09115.1
ABC-2 type transport system ATP-binding protein.
 
    0.868
SFW97926.1
Right handed beta helix region.
  
 0.829
SFX19549.1
3-hydroxyacyl-CoA dehydrogenase.
   
 
 0.732
SFX48499.1
Phage minor structural protein, N-terminal region.
  
   0.723
SFX71924.1
Phage minor structural protein, N-terminal region.
  
   0.704
SFX83580.1
Phage minor structural protein, N-terminal region.
  
   0.704
SFX82871.1
Hypothetical protein.
 
 
 
 0.696
SFX09941.1
Cytotoxic.
   
  0.643
SFX61921.1
Hypothetical protein.
   
  0.643
Your Current Organism:
Thermoactinomyces sp. DSM 45891
NCBI taxonomy Id: 1761907
Other names: T. sp. DSM 45891
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.