VRK_17640 protein (Vibrio sp. MEBiC08052) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

VRK_17640

Hypothetical protein. (228 aa)

Predicted Functional Partners:

VRK_17650

0.998

VRK_17560

0.997

VRK_17510

0.996

VRK_17550

0.995

VRK_17660

0.993

VRK_17680

0.989

VRK_17490

0.979

VRK_17500

0.973

VRK_17630

0.936

VRK_40680

0.920

Your Current Organism:

Vibrio sp. MEBiC08052

NCBI taxonomy Id: 1761910
Other names: V. sp. MEBiC08052

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
VRK_17490	VRK_17500	Late control D family protein.	Tail X family protein.	0.966
VRK_17490	VRK_17510	Late control D family protein.	Phage P2 GpU family protein.	0.993
VRK_17490	VRK_17550	Late control D family protein.	Major tail tube protein.	0.976
VRK_17490	VRK_17560	Late control D family protein.	Hypothetical protein.	0.996
VRK_17490	VRK_17630	Late control D family protein.	Hypothetical protein.	0.780
VRK_17490	VRK_17640	Late control D family protein.	Hypothetical protein.	0.979
VRK_17490	VRK_17650	Late control D family protein.	Baseplate J family protein.	0.979
VRK_17490	VRK_17660	Late control D family protein.	Putative phage-related protein.	0.984
VRK_17490	VRK_17680	Late control D family protein.	Hypothetical protein.	0.979
VRK_17490	VRK_40680	Late control D family protein.	Hypothetical protein.	0.962
VRK_17500	VRK_17490	Tail X family protein.	Late control D family protein.	0.966
VRK_17500	VRK_17510	Tail X family protein.	Phage P2 GpU family protein.	0.995
VRK_17500	VRK_17550	Tail X family protein.	Major tail tube protein.	0.984
VRK_17500	VRK_17560	Tail X family protein.	Hypothetical protein.	0.978
VRK_17500	VRK_17630	Tail X family protein.	Hypothetical protein.	0.854
VRK_17500	VRK_17640	Tail X family protein.	Hypothetical protein.	0.973
VRK_17500	VRK_17650	Tail X family protein.	Baseplate J family protein.	0.985
VRK_17500	VRK_17660	Tail X family protein.	Putative phage-related protein.	0.970
VRK_17500	VRK_17680	Tail X family protein.	Hypothetical protein.	0.902
VRK_17500	VRK_40680	Tail X family protein.	Hypothetical protein.	0.964