STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP0198Teichoic acid biosynthesis protein, putative; Identified by match to protein family HMM PF04464. (564 aa)    
Predicted Functional Partners:
tarJ
Alcohol dehydrogenase, zinc-containing; Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate; Belongs to the zinc-containing alcohol dehydrogenase family.
 
  
 0.975
tarI
4-diphosphocytidyl-2C-methyl-D-erythritol synthase, putative; Catalyzes the transfer of the cytidylyl group of CTP to D- ribitol 5-phosphate.
 
  
 0.964
SERP0297
tagG protein, teichoic acid ABC transporter protein, putative; Identified by similarity to EGAD:30975; match to protein family HMM PF01061.
 
  
 0.817
tagH
tagH protein, teichoic acid ABC transporter protein, putative; Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system.
 
 
 0.812
tagD
Glycerol-3-phosphate cytidylyltransferase; Identified by similarity to EGAD:16695; match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR01518.
 
  
 0.772
tagA
UDP-N-acetyl-D-mannosamine transferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
 
 
 0.547
SERP1958
TagF domain protein; Identified by match to protein family HMM PF04464.
 
  
0.482
SERP2210
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF04464.
 
  
0.481
SERP1409
ABC transporter, ATP-binding protein.
 
 
 0.429
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.