STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP0213Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA0544; match to protein family HMM PF02585. (221 aa)    
Predicted Functional Partners:
SERP0214
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA0545.
 
    0.985
folE2
Conserved hypothetical protein TIGR00294; Converts GTP to 7,8-dihydroneopterin triphosphate.
       0.879
nagB
Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
     
 0.777
SERP0707
Conserved hypothetical protein; Identified by similarity to OMNI:SA1126; match to protein family HMM PF04238.
  
     0.647
SERP0487
Toprim domain protein; Identified by match to protein family HMM PF01751.
  
     0.568
putA
Proline dehydrogenase; Identified by match to protein family HMM PF01619.
 
    0.549
SERP0252
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA0581.
  
     0.525
SERP0604
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA0903; Belongs to the 2H phosphoesterase superfamily. YjcG family.
  
     0.497
arsB-2
Arsenical pump membrane protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family.
       0.470
arsR-1
Arsenical resistance operon repressor; Identified by similarity to EGAD:10168; match to protein family HMM PF01022.
       0.470
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.