STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP0222Conserved hypothetical protein; Identified by similarity to OMNI:SA0624. (86 aa)    
Predicted Functional Partners:
vraA
Long chain fatty acid CoA ligase, putative; Identified by match to protein family HMM PF00501; Belongs to the ATP-dependent AMP-binding enzyme family.
       0.883
vraB
acetyl-CoA acetyltransferase, putative; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.
       0.883
SERP0221
Conserved hypothetical protein; Identified by similarity to OMNI:SA0623.
       0.883
SERP0218
Hydrolase, haloacid dehalogenase-like family; Identified by match to protein family HMM PF00702.
       0.505
proP
Major facilitator family transporter; May be a proton symporter involved in the uptake of osmolytes such as proline and glycine betaine; Belongs to the major facilitator superfamily. Metabolite:H+ Symporter (MHS) family (TC 2.A.1.6) family.
       0.437
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.