Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SERP0245 | SERP0246 | SERP0245 | SERP0246 | Transporter, putative; Identified by match to protein family HMM PF03176. | ABC transporter, substrate-binding protein, putative; Identified by match to protein family HMM PF04069. | 0.842 |
| SERP0245 | SERP0247 | SERP0245 | SERP0247 | Transporter, putative; Identified by match to protein family HMM PF03176. | Transcriptional regulator, putative. | 0.913 |
| SERP0246 | SERP0245 | SERP0246 | SERP0245 | ABC transporter, substrate-binding protein, putative; Identified by match to protein family HMM PF04069. | Transporter, putative; Identified by match to protein family HMM PF03176. | 0.842 |
| SERP0246 | SERP0247 | SERP0246 | SERP0247 | ABC transporter, substrate-binding protein, putative; Identified by match to protein family HMM PF04069. | Transcriptional regulator, putative. | 0.625 |
| SERP0246 | SERP0386 | SERP0246 | SERP0386 | ABC transporter, substrate-binding protein, putative; Identified by match to protein family HMM PF04069. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM PF04069. | 0.845 |
| SERP0246 | SERP1395 | SERP0246 | SERP1395 | ABC transporter, substrate-binding protein, putative; Identified by match to protein family HMM PF04069. | Amino acid ABC transporter, permease/amino acid-binding protein, putative; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726. | 0.555 |
| SERP0246 | SERP1863 | SERP0246 | SERP1863 | ABC transporter, substrate-binding protein, putative; Identified by match to protein family HMM PF04069. | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | 0.401 |
| SERP0246 | SERP2029 | SERP0246 | SERP2029 | ABC transporter, substrate-binding protein, putative; Identified by match to protein family HMM PF04069. | Amino acid ABC transporter, amino acid-binding protein; Identified by similarity to EGAD:109190; match to protein family HMM PF04069. | 0.429 |
| SERP0246 | SERP2356 | SERP0246 | SERP2356 | ABC transporter, substrate-binding protein, putative; Identified by match to protein family HMM PF04069. | Amino acid ABC transporter, amino acid-binding protein; Identified by similarity to EGAD:109208; match to protein family HMM PF04069. | 0.429 |
| SERP0246 | potA | SERP0246 | SERP0686 | ABC transporter, substrate-binding protein, putative; Identified by match to protein family HMM PF04069. | Spermidine/putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.421 |
| SERP0246 | purN | SERP0246 | SERP0657 | ABC transporter, substrate-binding protein, putative; Identified by match to protein family HMM PF04069. | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.430 |
| SERP0247 | SERP0245 | SERP0247 | SERP0245 | Transcriptional regulator, putative. | Transporter, putative; Identified by match to protein family HMM PF03176. | 0.913 |
| SERP0247 | SERP0246 | SERP0247 | SERP0246 | Transcriptional regulator, putative. | ABC transporter, substrate-binding protein, putative; Identified by match to protein family HMM PF04069. | 0.625 |
| SERP0247 | SERP1863 | SERP0247 | SERP1863 | Transcriptional regulator, putative. | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | 0.500 |
| SERP0386 | SERP0246 | SERP0386 | SERP0246 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM PF04069. | ABC transporter, substrate-binding protein, putative; Identified by match to protein family HMM PF04069. | 0.845 |
| SERP0386 | SERP1395 | SERP0386 | SERP1395 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM PF04069. | Amino acid ABC transporter, permease/amino acid-binding protein, putative; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726. | 0.546 |
| SERP0386 | SERP2029 | SERP0386 | SERP2029 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM PF04069. | Amino acid ABC transporter, amino acid-binding protein; Identified by similarity to EGAD:109190; match to protein family HMM PF04069. | 0.947 |
| SERP0386 | SERP2356 | SERP0386 | SERP2356 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM PF04069. | Amino acid ABC transporter, amino acid-binding protein; Identified by similarity to EGAD:109208; match to protein family HMM PF04069. | 0.947 |
| SERP0386 | potA | SERP0386 | SERP0686 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM PF04069. | Spermidine/putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.439 |
| SERP1395 | SERP0246 | SERP1395 | SERP0246 | Amino acid ABC transporter, permease/amino acid-binding protein, putative; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726. | ABC transporter, substrate-binding protein, putative; Identified by match to protein family HMM PF04069. | 0.555 |
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