STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adhAlcohol dehydrogenase, zinc-containing; Identified by similarity to EGAD:15881; match to protein family HMM PF00107. (340 aa)    
Predicted Functional Partners:
SERP0389
Alcohol dehydrogenase, iron-containing; Identified by similarity to SP:P17547; match to protein family HMM PF00171; match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.978
SERP1729
Aldehyde dehydrogenase; Identified by match to protein family HMM PF00171.
 
 
 0.976
aldA-1
Aldehyde dehydrogenase; Identified by similarity to EGAD:18867; match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
 
 
 0.973
SERP2469
Alcohol dehydrogenase, zinc-containing; Identified by match to protein family HMM PF00107.
  
 
0.964
aldA-2
Aldehyde dehydrogenase; Identified by similarity to EGAD:15875; match to protein family HMM PF00171.
 
 
 0.962
SERP1962
Alcohol dehydrogenase, zinc-containing; Identified by similarity to EGAD:15882; match to protein family HMM PF00107.
  
 
 0.909
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 
 0.680
pflB
Formate acetyltransferase; Identified by similarity to SP:P09373; match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01255; Belongs to the glycyl radical enzyme (GRE) family. PFL subfamily.
   
  
 0.574
SERP0258
Hypothetical protein; Identified by Glimmer2; putative.
       0.550
SERP2257
Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by similarity to GP:5777659; match to protein family HMM PF00106; match to protein family HMM PF00678.
 
 
 0.498
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.