Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| SERP0266 | SERP0267 | Iron compound ABC transporter, iron compound-binding protein, putative; Identified by match to protein family HMM PF01497. | Iron compound ABC transporter, permease protein; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.991 |
| SERP0266 | SERP0268 | Iron compound ABC transporter, iron compound-binding protein, putative; Identified by match to protein family HMM PF01497. | Hydrolase, haloacid dehalogenase-like family; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549. | 0.747 |
| SERP0266 | SERP0269 | Iron compound ABC transporter, iron compound-binding protein, putative; Identified by match to protein family HMM PF01497. | Hydrolase, alpha/beta hydrolase fold family; Identified by match to protein family HMM PF00561. | 0.747 |
| SERP0266 | SERP0270 | Iron compound ABC transporter, iron compound-binding protein, putative; Identified by match to protein family HMM PF01497. | Conserved hypothetical protein; Identified by similarity to OMNI:SA0669. | 0.708 |
| SERP0266 | SERP0272 | Iron compound ABC transporter, iron compound-binding protein, putative; Identified by match to protein family HMM PF01497. | Conserved hypothetical protein; Identified by similarity to OMNI:SA0670. | 0.546 |
| SERP0267 | SERP0266 | Iron compound ABC transporter, permease protein; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Iron compound ABC transporter, iron compound-binding protein, putative; Identified by match to protein family HMM PF01497. | 0.991 |
| SERP0267 | SERP0268 | Iron compound ABC transporter, permease protein; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Hydrolase, haloacid dehalogenase-like family; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549. | 0.846 |
| SERP0267 | SERP0269 | Iron compound ABC transporter, permease protein; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Hydrolase, alpha/beta hydrolase fold family; Identified by match to protein family HMM PF00561. | 0.846 |
| SERP0267 | SERP0270 | Iron compound ABC transporter, permease protein; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Conserved hypothetical protein; Identified by similarity to OMNI:SA0669. | 0.755 |
| SERP0267 | SERP0272 | Iron compound ABC transporter, permease protein; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Conserved hypothetical protein; Identified by similarity to OMNI:SA0670. | 0.625 |
| SERP0268 | SERP0266 | Hydrolase, haloacid dehalogenase-like family; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549. | Iron compound ABC transporter, iron compound-binding protein, putative; Identified by match to protein family HMM PF01497. | 0.747 |
| SERP0268 | SERP0267 | Hydrolase, haloacid dehalogenase-like family; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549. | Iron compound ABC transporter, permease protein; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.846 |
| SERP0268 | SERP0269 | Hydrolase, haloacid dehalogenase-like family; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549. | Hydrolase, alpha/beta hydrolase fold family; Identified by match to protein family HMM PF00561. | 0.957 |
| SERP0268 | SERP0270 | Hydrolase, haloacid dehalogenase-like family; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549. | Conserved hypothetical protein; Identified by similarity to OMNI:SA0669. | 0.788 |
| SERP0268 | SERP0272 | Hydrolase, haloacid dehalogenase-like family; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549. | Conserved hypothetical protein; Identified by similarity to OMNI:SA0670. | 0.732 |
| SERP0268 | SERP0273 | Hydrolase, haloacid dehalogenase-like family; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549. | Hydrolase, alpha/beta hydrolase fold family; Identified by match to protein family HMM PF00561. | 0.432 |
| SERP0269 | SERP0266 | Hydrolase, alpha/beta hydrolase fold family; Identified by match to protein family HMM PF00561. | Iron compound ABC transporter, iron compound-binding protein, putative; Identified by match to protein family HMM PF01497. | 0.747 |
| SERP0269 | SERP0267 | Hydrolase, alpha/beta hydrolase fold family; Identified by match to protein family HMM PF00561. | Iron compound ABC transporter, permease protein; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.846 |
| SERP0269 | SERP0268 | Hydrolase, alpha/beta hydrolase fold family; Identified by match to protein family HMM PF00561. | Hydrolase, haloacid dehalogenase-like family; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549. | 0.957 |
| SERP0269 | SERP0270 | Hydrolase, alpha/beta hydrolase fold family; Identified by match to protein family HMM PF00561. | Conserved hypothetical protein; Identified by similarity to OMNI:SA0669. | 0.788 |
page 1 of 2