STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP0337Conserved hypothetical protein; Identified by similarity to OMNI:SA0742. (226 aa)    
Predicted Functional Partners:
SERP0336
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA0657; match to protein family HMM PF02639; Belongs to the UPF0178 family.
       0.883
SERP0335
Decarboxylase family protein; Identified by similarity to OMNI:SA0740; match to protein family HMM PF03641; match to protein family HMM TIGR00730; Belongs to the LOG family.
       0.882
bacA
Bacitracin resistance protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
      0.874
SERP2264
Cell wall surface anchor family protein.
  
     0.763
sdrH
sdrH protein; Identified by similarity to GP:8101009.
  
     0.748
tcaA
tcaA protein; Plays a major role in decreasing resistance to glycopeptide antibiotics; Belongs to the TcaA family.
  
     0.745
SERP2149
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.742
SERP0635
Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047.
  
     0.723
SERP0406
Conserved hypothetical protein; Identified by similarity to OMNI:SA0802; match to protein family HMM PF04229.
  
     0.712
SERP1453
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA1794.
  
     0.704
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.