Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SERP0362Oxidoreductase, aldo/keto reductase family; Identified by match to protein family HMM PF00248. (279 aa)    
Predicted Functional Partners:
SERP0361
CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471.
  
    0.708
SERP0363
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.
  
    0.702
SERP1063
Oxidoreductase, aldo/keto reductase family; Identified by match to protein family HMM PF00248.
 
 
0.550
SERP0244
Oxidoreductase, aldo/keto reductase family; Identified by match to protein family HMM PF00248.
 
 
0.531
SERP1786
Alcohol dehydrogenase, zinc-containing; Identified by match to protein family HMM PF00107.
   
 
 0.444
nagA
N-acetylglucosamine-6-phosphate deacetylase; Identified by similarity to EGAD:107401; match to protein family HMM PF01979; match to protein family HMM TIGR00221.
  
    0.431
SERP0035
Homocysteine S-methyltransferase/5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574.
  
 0.415
tkt
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
   
 
 0.402
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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