Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SERP0016 | metN1 | SERP0016 | SERP0097 | ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.705 |
| SERP0016 | metN2 | SERP0016 | SERP0489 | ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.711 |
| SERP0035 | SERP0098 | SERP0035 | SERP0098 | Homocysteine S-methyltransferase/5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.500 |
| SERP0035 | SERP0099 | SERP0035 | SERP0099 | Homocysteine S-methyltransferase/5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574. | ABC transporter, substrate-binding protein; Identified by match to protein family HMM PF03180; Belongs to the nlpA lipoprotein family. | 0.604 |
| SERP0035 | SERP0488 | SERP0035 | SERP0488 | Homocysteine S-methyltransferase/5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574. | Thioredoxin, putative. | 0.420 |
| SERP0035 | SERP0490 | SERP0035 | SERP0490 | Homocysteine S-methyltransferase/5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.500 |
| SERP0035 | SERP0491 | SERP0035 | SERP0491 | Homocysteine S-methyltransferase/5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574. | ABC transporter, substrate-binding protein; Identified by match to protein family HMM PF03180; Belongs to the nlpA lipoprotein family. | 0.604 |
| SERP0035 | metN1 | SERP0035 | SERP0097 | Homocysteine S-methyltransferase/5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574. | ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.711 |
| SERP0035 | metN2 | SERP0035 | SERP0489 | Homocysteine S-methyltransferase/5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574. | ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.711 |
| SERP0098 | SERP0035 | SERP0098 | SERP0035 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Homocysteine S-methyltransferase/5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574. | 0.500 |
| SERP0098 | SERP0099 | SERP0098 | SERP0099 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ABC transporter, substrate-binding protein; Identified by match to protein family HMM PF03180; Belongs to the nlpA lipoprotein family. | 0.999 |
| SERP0098 | SERP0490 | SERP0098 | SERP0490 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.908 |
| SERP0098 | SERP0491 | SERP0098 | SERP0491 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ABC transporter, substrate-binding protein; Identified by match to protein family HMM PF03180; Belongs to the nlpA lipoprotein family. | 0.993 |
| SERP0098 | metN1 | SERP0098 | SERP0097 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.998 |
| SERP0098 | metN2 | SERP0098 | SERP0489 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.990 |
| SERP0099 | SERP0035 | SERP0099 | SERP0035 | ABC transporter, substrate-binding protein; Identified by match to protein family HMM PF03180; Belongs to the nlpA lipoprotein family. | Homocysteine S-methyltransferase/5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574. | 0.604 |
| SERP0099 | SERP0098 | SERP0099 | SERP0098 | ABC transporter, substrate-binding protein; Identified by match to protein family HMM PF03180; Belongs to the nlpA lipoprotein family. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.999 |
| SERP0099 | SERP0490 | SERP0099 | SERP0490 | ABC transporter, substrate-binding protein; Identified by match to protein family HMM PF03180; Belongs to the nlpA lipoprotein family. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.991 |
| SERP0099 | SERP0491 | SERP0099 | SERP0491 | ABC transporter, substrate-binding protein; Identified by match to protein family HMM PF03180; Belongs to the nlpA lipoprotein family. | ABC transporter, substrate-binding protein; Identified by match to protein family HMM PF03180; Belongs to the nlpA lipoprotein family. | 0.918 |
| SERP0099 | metN1 | SERP0099 | SERP0097 | ABC transporter, substrate-binding protein; Identified by match to protein family HMM PF03180; Belongs to the nlpA lipoprotein family. | ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.998 |
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