STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP0494Conserved hypothetical protein; Identified by similarity to OMNI:SA0912; match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family. (63 aa)    
Predicted Functional Partners:
SERP1973
General stress protein 26, putative; Identified by similarity to EGAD:107318.
  
    0.661
SERP1189
Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738.
       0.636
SERP1190
ATPase, AAA family; Identified by match to protein family HMM PF00004.
       0.636
SERP2452
Conserved domain protein.
  
  
 0.614
SERP2066
Conserved hypothetical protein; Identified by similarity to EGAD:108077.
   
    0.537
SERP0493
Hypothetical protein; Identified by Glimmer2; putative.
       0.518
SERP2082
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
  
    0.513
SERP1014
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01XF01748.
  
    0.476
lacD
Tagatose 1,6-diphosphate aldolase; Identified by similarity to EGAD:9829; match to protein family HMM PF04274; match to protein family HMM TIGR01232; Belongs to the aldolase LacD family.
   
    0.465
SERP1754
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA2023.
   
    0.463
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.