STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP0514Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA0817; match to protein family HMM PF01934. (144 aa)    
Predicted Functional Partners:
SERP0513
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA0816.
 
     0.948
nagD
Hydrolase, haloacid dehalogenase-like family; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family.
     
 0.894
SERP0516
D-isomer specific 2-hydroxyacid dehydrogenase family protein; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.861
SERP0848
ACT domain protein; Identified by match to protein family HMM PF01842.
  
     0.771
SERP0252
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA0581.
  
     0.761
SERP1410
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA1749.
  
     0.757
sdhC
Succinate dehydrogenase, cytochrome b558 subunit; Identified by similarity to EGAD:20778.
  
     0.742
SERP0604
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA0903; Belongs to the 2H phosphoesterase superfamily. YjcG family.
  
     0.733
SERP0741
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
  
     0.716
SERP0700
Conserved hypothetical protein; Identified by similarity to OMNI:SA1120.
  
     0.711
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.