STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP0524NADH dehydrogenase, putative; Identified by similarity to SP:P00393; match to protein family HMM PF00070. (354 aa)    
Predicted Functional Partners:
SERP0527
NADH dehydrogenase, putative; Identified by match to protein family HMM PF00070.
 
  
 
0.948
nuoF
NADH dehydrogenase I, F subunit; Identified by similarity to EGAD:17979; match to protein family HMM PF00361.
  
 
 0.923
SERP0525
Conserved hypothetical protein; Identified by similarity to OMNI:SA0942; Belongs to the UPF0349 family.
 
  
 0.822
SERP0526
HesB domain protein; Identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; Belongs to the HesB/IscA family.
  
    0.769
ywpF
ywpF protein; Identified by similarity to OMNI:SA2090.
  
     0.584
gpm
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
    
   0.563
SERP1667
Acetolactate synthase, small subunit, truncation; Identified by similarity to EGAD:12389; match to protein family HMM PF01842.
 
     0.536
SERP1375
Conserved hypothetical protein; Identified by similarity to OMNI:SA1896.
  
     0.512
cydA
Cytochrome d ubiquinol oxidase, subunit I; Identified by similarity to EGAD:98907; match to protein family HMM PF01654.
 
   
 0.458
SERP1354
Conserved hypothetical protein; Identified by similarity to OMNI:SA1840.
  
     0.431
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.