STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP0557Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA0858. (133 aa)    
Predicted Functional Partners:
SERP0556
Identified by match to protein family HMM PF01557; Belongs to the FAH family.
 
     0.807
SERP0975
xpaC protein, putative; Identified by similarity to EGAD:19663.
  
     0.764
ebpS
Elastin binding protein, putative; Identified by match to protein family HMM PF01476.
  
     0.743
SERP1733
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA2005.
  
     0.740
SERP1212
Rod shape-determining protein MreD, putative; Identified by match to protein family HMM PF04093.
  
     0.734
SERP0700
Conserved hypothetical protein; Identified by similarity to OMNI:SA1120.
  
     0.731
SERP0615
Conserved hypothetical protein; Identified by similarity to OMNI:SA1035.
  
     0.728
traP
RNAIII-activating protein TRAP; Contributes to virulence and biofilm formation.
  
     0.720
SERP1299
Conserved hypothetical protein; Identified by similarity to OMNI:SA1789.
  
     0.693
rexA
Exonuclease RexA; The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddA nuclease domain is required for chi fragment generation; this subunit has the helicase and 3' -> 5' nuclease activities; Belongs to the helicase family. AddA subfamily.
  
    0.692
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.