STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP0690Conserved hypothetical protein; Identified by similarity to OMNI:SA1112. (383 aa)    
Predicted Functional Partners:
potA
Spermidine/putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
       0.838
potB
Spermidine/putrescine ABC transporter, permease protein PotB; Identified by similarity to EGAD:24120; match to protein family HMM PF00528.
       0.838
potC
Spermidine/putrescine ABC transporter, permease protein PotC; Identified by similarity to EGAD:15490; match to protein family HMM PF00528.
       0.838
potD
Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein; Identified by similarity to EGAD:16715; match to protein family HMM PF01547.
       0.838
SERP0685
Transcriptional regulator, Cro/CI family; Identified by match to protein family HMM PF01381.
       0.832
SERP0684
Conserved hypothetical protein; Identified by similarity to OMNI:SA1106; match to protein family HMM PF05256; Belongs to the UPF0223 family.
       0.759
SERP0691
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA0989.
       0.474
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.