STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP0879Conserved hypothetical protein; Identified by similarity to OMNI:NTL02SA0882; match to protein family HMM PF04233; match to protein family HMM TIGR01641. (448 aa)    
Predicted Functional Partners:
SERP0880
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA1196.
       0.774
SERP2264
Cell wall surface anchor family protein.
  
     0.694
sdrH
sdrH protein; Identified by similarity to GP:8101009.
  
    0.635
SERP0878
Portal protein, truncation.
       0.611
SERP2063
Esterase, putative; Identified by similarity to SP:P22862.
  
    0.608
SERP0331
Conserved hypothetical protein; Identified by similarity to OMNI:SA0735.
  
     0.592
SERP0635
Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047.
  
     0.581
geh-1
Lipase; Identified by similarity to GP:2981225; match to protein family HMM PF04650; match to protein family HMM TIGR01168; Belongs to the AB hydrolase superfamily. Lipase family.
  
     0.570
tcaA
tcaA protein; Plays a major role in decreasing resistance to glycopeptide antibiotics; Belongs to the TcaA family.
  
     0.569
SERP1050
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SA1365.
  
     0.545
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.