| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SERP0910 | SERP0911 | SERP0910 | SERP0911 | Conserved hypothetical protein; Identified by similarity to OMNI:SA1375. | Conserved hypothetical protein; Identified by similarity to OMNI:SA1376. | 0.531 |
| SERP0910 | lexA | SERP0910 | SERP0909 | Conserved hypothetical protein; Identified by similarity to OMNI:SA1375. | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.618 |
| SERP0911 | SERP0910 | SERP0911 | SERP0910 | Conserved hypothetical protein; Identified by similarity to OMNI:SA1376. | Conserved hypothetical protein; Identified by similarity to OMNI:SA1375. | 0.531 |
| SERP0911 | lexA | SERP0911 | SERP0909 | Conserved hypothetical protein; Identified by similarity to OMNI:SA1376. | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.653 |
| SERP0935 | dinG | SERP0935 | SERP1025 | Identified by match to protein family HMM PF00817; Belongs to the DNA polymerase type-Y family. | DNA polymerase III, epsilon subunit/ATP-dependent helicase DinG; 3'-5' exonuclease. | 0.528 |
| SERP0935 | dmpI | SERP0935 | SERP0934 | Identified by match to protein family HMM PF00817; Belongs to the DNA polymerase type-Y family. | 4-oxalocrotonate tautomerase; Identified by similarity to SP:Q01468; match to protein family HMM PF01361; match to protein family HMM TIGR00013; Belongs to the 4-oxalocrotonate tautomerase family. | 0.753 |
| SERP0935 | lexA | SERP0935 | SERP0909 | Identified by match to protein family HMM PF00817; Belongs to the DNA polymerase type-Y family. | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.717 |
| SERP0935 | recA | SERP0935 | SERP0852 | Identified by match to protein family HMM PF00817; Belongs to the DNA polymerase type-Y family. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.731 |
| dinG | SERP0935 | SERP1025 | SERP0935 | DNA polymerase III, epsilon subunit/ATP-dependent helicase DinG; 3'-5' exonuclease. | Identified by match to protein family HMM PF00817; Belongs to the DNA polymerase type-Y family. | 0.528 |
| dinG | dinP | SERP1025 | SERP1433 | DNA polymerase III, epsilon subunit/ATP-dependent helicase DinG; 3'-5' exonuclease. | DNA-damage-inducible protein P; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.528 |
| dinG | lexA | SERP1025 | SERP0909 | DNA polymerase III, epsilon subunit/ATP-dependent helicase DinG; 3'-5' exonuclease. | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.654 |
| dinG | recA | SERP1025 | SERP0852 | DNA polymerase III, epsilon subunit/ATP-dependent helicase DinG; 3'-5' exonuclease. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.720 |
| dinG | recN | SERP1025 | SERP1080 | DNA polymerase III, epsilon subunit/ATP-dependent helicase DinG; 3'-5' exonuclease. | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.488 |
| dinP | dinG | SERP1433 | SERP1025 | DNA-damage-inducible protein P; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | DNA polymerase III, epsilon subunit/ATP-dependent helicase DinG; 3'-5' exonuclease. | 0.528 |
| dinP | lexA | SERP1433 | SERP0909 | DNA-damage-inducible protein P; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.697 |
| dinP | recA | SERP1433 | SERP0852 | DNA-damage-inducible protein P; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.825 |
| dmpI | SERP0935 | SERP0934 | SERP0935 | 4-oxalocrotonate tautomerase; Identified by similarity to SP:Q01468; match to protein family HMM PF01361; match to protein family HMM TIGR00013; Belongs to the 4-oxalocrotonate tautomerase family. | Identified by match to protein family HMM PF00817; Belongs to the DNA polymerase type-Y family. | 0.753 |
| dmpI | lexA | SERP0934 | SERP0909 | 4-oxalocrotonate tautomerase; Identified by similarity to SP:Q01468; match to protein family HMM PF01361; match to protein family HMM TIGR00013; Belongs to the 4-oxalocrotonate tautomerase family. | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.773 |
| ftsZ | gpsB | SERP0751 | SERP1016 | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | Conserved hypothetical protein; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | 0.742 |
| ftsZ | lexA | SERP0751 | SERP0909 | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.578 |
