Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SERP0950Peptide ABC transporter, ATP-binding protein, putative; Identified by similarity to EGAD:89055; match to protein family HMM PF00005. (231 aa)    
Predicted Functional Partners:
SERP0952
Peptide ABC transporter, permease protein, putative; Identified by similarity to EGAD:9991; match to protein family HMM PF00528.
 
 0.996
SERP0953
Peptide ABC transporter, permease protein, putative; Identified by match to protein family HMM PF00528.
 
 
 0.993
SERP0951
Peptide ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM PF00005.
 
 
 
0.986
SERP1994
ABC transporter, substrate-binding protein; Identified by match to protein family HMM PF00496.
 
 
 0.953
SERP2370
Peptide ABC transporter, permease protein; Identified by similarity to EGAD:128691; match to protein family HMM PF00528.
  
 0.905
hrtA
ABC transporter, ATP-binding protein; Part of the ABC transporter complex hrt involved in hemin import. Responsible for energy coupling to the transport system (By similarity).
 
    
0.830
oppC
Oligopeptide ABC transporter, permease protein; Identified by similarity to GP:10717145; match to protein family HMM PF00528.
  
 0.779
SERP2371
Peptide ABC transporter, permease protein, putative; Identified by similarity to GP:5457576; match to protein family HMM PF00528.
 
  
 0.725
oppB
Oligopeptide ABC transporter, permease protein; Identified by similarity to EGAD:8134; match to protein family HMM PF00528.
 
  
 0.701
SERP1004
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
    
0.659
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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