Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SERP0974Acylphosphatase; Identified by match to protein family HMM PF00708. (89 aa)    
Predicted Functional Partners:
pta
Phosphate acetyltransferase; Identified by similarity to SP:P39646; match to protein family HMM PF01515; match to protein family HMM TIGR00651.
    
 0.936
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
     
 0.913
SERP2115
Pyruvate oxidase; Identified by similarity to EGAD:10763; match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family.
     
 0.906
SERP2172
acetyl-CoA synthetase, putative; Identified by similarity to EGAD:18603; match to protein family HMM PF00501.
     
 0.903
SERP1729
Aldehyde dehydrogenase; Identified by match to protein family HMM PF00171.
    
 0.901
aldA-2
Aldehyde dehydrogenase; Identified by similarity to EGAD:15875; match to protein family HMM PF00171.
    
 0.901
SERP0975
xpaC protein, putative; Identified by similarity to EGAD:19663.
       0.810
SERP0976
Tellurite resistance protein, putative; Identified by match to protein family HMM PF05816; Belongs to the TelA family.
       0.782
SERP0973
Conserved hypothetical protein; Identified by similarity to OMNI:SA1438.
       0.749
cspA
Cold shock protein, CSD family; Involved in cold stress response.
       0.504
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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